EnhancerDB
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  3. rs543688[chr1:183236462]
Enhancers that have rs543688[chr1:183236462]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 183231145 183244789 enh12448
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Muscle (Myoblast) Breast Thymus Heart
Transcript factors that have rs543688[chr1:183236462]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 183236446 183236467 IRF1 JASPAR yes 33666495
chr1 183236450 183236465 STAT2 JASPAR yes 33666496
chr1 183236450 183236471 IRF1 JASPAR yes 33666497
chr1 183236451 183236463 IRF1 JASPAR yes 33666498
chr1 183236456 183236471 FOXP1 JASPAR yes 33666499
chr1 183236458 183236469 FOXC1 JASPAR yes 33666500
chr1 183236458 183236470 FOXC2 JASPAR yes 33666501
chr1 183236460 183236474 FOXF2 JASPAR yes 33666502
chr1 183236460 183236475 FOXP1 JASPAR yes 33666503
chr1 183236461 183236472 FOXA1 JASPAR yes 33666504
chr1 183236461 183236476 FOXA1 JASPAR yes 33666505
chr1 183236462 183236473 FOXB1 JASPAR yes 33666506
chr1 183236462 183236473 FOXC1 JASPAR yes 33666507
chr1 183236462 183236474 FOXC2 JASPAR yes 33666508
Genes associated with rs543688[chr1:183236462], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More