EnhancerDB
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  3. rs543936490[chr11:66652958]
Enhancers that have rs543936490[chr11:66652958]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 66643125 66662804 enh1843
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs543936490[chr11:66652958]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 66652953 66652968 MEF2C JASPAR yes 39385505
chr11 66652956 66652971 FOXP1 JASPAR yes 39385506
chr11 66652957 66652963 TBP TRANSFAC yes 39385507
chr11 66652957 66652972 FOXP1 JASPAR yes 39385508
chr11 66652957 66652978 IRF1 JASPAR yes 39385509
chr11 66652958 66652973 FOXP1 JASPAR yes 39385510
chr11 66652958 66652979 IRF1 JASPAR yes 39385511
Genes associated with rs543936490[chr11:66652958], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More