EnhancerDB
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  3. rs544197256[chr1:117035197]
Enhancers that have rs544197256[chr1:117035197]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs544197256[chr1:117035197]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117034508 117035477 ZNF143 GTRD no Epithelial (MCF-7) 21333054
chr1 117034672 117035302 ZNF143 GTRD no Epithelial (MCF-7) 21333056
chr1 117034778 117035228 ZNF143 GTRD no Epithelial (MCF-7) 21333058
chr1 117035171 117035535 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333061
chr1 117035178 117035198 RREB1 JASPAR yes 31813354
chr1 117035183 117035203 RREB1 JASPAR yes 31813355
chr1 117035187 117035197 SP1 JASPAR yes 31813361
chr1 117035187 117035197 ZNF740 JASPAR yes 31813362
chr1 117035188 117035198 SP1 JASPAR yes 31813363
chr1 117035188 117035198 ZNF740 JASPAR yes 31813364
chr1 117035189 117035199 ZNF740 JASPAR yes 31813365
chr1 117035195 117035599 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333062
Genes associated with rs544197256[chr1:117035197], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More