EnhancerDB
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  3. rs544246561[chr1:165827021]
Enhancers that have rs544246561[chr1:165827021]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 165800587 165834795 enh699
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs544246561[chr1:165827021]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 165827021 165827033 PKNOX1 JASPAR yes 32804613
chr1 165827021 165827033 PKNOX2 JASPAR yes 32804614
chr1 165827021 165827033 TGIF1 JASPAR yes 32804615
chr1 165827021 165827033 TGIF2 JASPAR yes 32804616
Genes associated with rs544246561[chr1:165827021], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More