EnhancerDB
  1. Home
  2. SNP
  3. rs544316079[chr1:42358956]
Enhancers that have rs544316079[chr1:42358956]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42354446 42370305 enh11796
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Thymus Heart
Transcript factors that have rs544316079[chr1:42358956]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42358950 42358960 NKX2-3 JASPAR yes 28434591
chr1 42358951 42358960 NKX3-2 JASPAR yes 28434592
Genes associated with rs544316079[chr1:42358956], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More