EnhancerDB
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  3. rs544398505[chr15:41254427]
Enhancers that have rs544398505[chr15:41254427]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 41249652 41255415 enh16071
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Placenta Colon (HCT116) Neural Stem Cells (H9) Epithelial (MCF-7)
chr15 41254301 41254691 vista19751
VISTA
Transcript factors that have rs544398505[chr15:41254427]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 41254180 41255222 AR GTRD no Prostate (PC-3) 21651167
chr15 41254180 41255222 AR GTRD no Prostate (PC-3) 108134894
chr15 41254322 41254686 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21651168
chr15 41254322 41254686 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108134895
chr15 41254355 41254735 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108134896
chr15 41254391 41254711 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108134897
chr15 41254411 41254429 NFYA JASPAR yes 22965398
chr15 41254411 41254429 NFYA JASPAR yes 70513244
chr15 41254414 41254429 MAFK JASPAR yes 22965399
chr15 41254414 41254429 MAFK JASPAR yes 70513245
chr15 41254418 41254429 NRL JASPAR yes 22965403
chr15 41254418 41254429 NRL JASPAR yes 70513249
chr15 41254420 41254435 AR JASPAR yes 22965404
chr15 41254420 41254435 AR JASPAR yes 70513250
chr15 41254427 41254442 FOXP1 JASPAR yes 22965405
chr15 41254427 41254442 FOXP1 JASPAR yes 70513251
Genes associated with rs544398505[chr15:41254427], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More