EnhancerDB
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  3. rs544541565[chr1:172612774]
Enhancers that have rs544541565[chr1:172612774]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172604705 172618495 enh27243
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Lung (A549) Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Spleen Thymus
Transcript factors that have rs544541565[chr1:172612774]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172612692 172613002 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21350146
chr1 172612694 172612958 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21350147
chr1 172612764 172612785 ZNF263 JASPAR yes 33142920
chr1 172612772 172612793 IRF1 JASPAR yes 33142921
chr1 172612774 172612779 TFAP2A TRANSFAC yes 33142922
chr1 172612774 172612780 MZF1 JASPAR yes 33142923
Genes associated with rs544541565[chr1:172612774], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More