EnhancerDB
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Enhancers that have rs544594[chr1:201449355]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201440605 201452315 enh876
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Muscle (A673) Placenta Blood (Karpas-422) Pancreas Thymus
Transcript factors that have rs544594[chr1:201449355]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201448929 201449610 ZNF274 GTRD no Bone Marrow (K562) 21364276
chr1 201448929 201449610 ZNF274 GTRD no Bone Marrow (K562) 107856288
chr1 201448935 201449631 ZNF274 GTRD no Blood (GM12878) 107856289
chr1 201449281 201450369 POLR2A UCSC Txn Factor no Conserved 107856290
chr1 201449291 201449671 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107856291
chr1 201449293 201449553 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21364277
chr1 201449317 201449817 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107856292
chr1 201449328 201449784 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21364278
chr1 201449328 201449784 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856293
chr1 201449345 201449360 FOXP1 JASPAR yes 34497605
chr1 201449346 201449357 FOXP2 JASPAR yes 34497606
chr1 201449347 201449362 FOXP1 JASPAR yes 34497607
chr1 201449350 201449754 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21364279
chr1 201449350 201449754 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856294
chr1 201449352 201449716 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21364280
chr1 201449352 201449716 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856295
chr1 201449354 201449368 RXRB JASPAR yes 34497608
chr1 201449354 201449368 RXRG JASPAR yes 34497609
chr1 201449354 201449369 LEF1 JASPAR yes 34497610
chr1 201449354 201449369 NR2C2 JASPAR yes 34497611
chr1 201449354 201449584 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21364281
Genes associated with rs544594[chr1:201449355], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More