EnhancerDB
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Enhancers that have rs544645[chr1:115973487]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 115966905 115976995 enh27090
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung (A549) Colon (HCT116) Thyroid Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs544645[chr1:115973487]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 115973201 115973600 ZNF274 GTRD no Cervix (HeLa-S3) 21331042
chr1 115973285 115973935 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331043
chr1 115973367 115973823 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331044
chr1 115973368 115973827 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331045
chr1 115973381 115973857 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331046
chr1 115973397 115973717 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331047
chr1 115973397 115973793 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331048
chr1 115973400 115973784 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331049
chr1 115973406 115973776 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331050
chr1 115973416 115973760 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331051
chr1 115973425 115973755 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331052
chr1 115973426 115973677 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21331053
chr1 115973427 115973690 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331054
chr1 115973444 115973734 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331055
chr1 115973456 115973740 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21331056
chr1 115973458 115973718 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331057
chr1 115973462 115973722 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21331058
chr1 115973465 115973769 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331059
chr1 115973471 115973727 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21331060
chr1 115973472 115973738 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331061
chr1 115973476 115973670 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331062
chr1 115973477 115973841 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331063
chr1 115973479 115973491 PKNOX1 JASPAR yes 31735702
chr1 115973479 115973491 TGIF1 JASPAR yes 31735703
chr1 115973479 115973491 TGIF2 JASPAR yes 31735704
chr1 115973484 115973492 MEIS2 JASPAR yes 31735705
chr1 115973484 115973492 MEIS3 JASPAR yes 31735706
chr1 115973485 115973489 NFE TRANSFAC yes 31735707
Genes associated with rs544645[chr1:115973487], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More