EnhancerDB
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  3. rs544772420[chr2:231559473]
Enhancers that have rs544772420[chr2:231559473]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 231540245 231567455 enh19309
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Muscle (A673) Placenta Colon (HCT116) Thyroid Lung (PC-9) Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs544772420[chr2:231559473]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 231559471 231559481 POU6F2 JASPAR yes 81673403
chr2 231559472 231559482 EMX1 JASPAR yes 81673404
chr2 231559473 231559481 NKX6-1 JASPAR yes 81673405
chr2 231559473 231559481 NKX6-2 JASPAR yes 81673406
Genes associated with rs544772420[chr2:231559473], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More