EnhancerDB
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  3. rs544909474[chr1:17225206]
Enhancers that have rs544909474[chr1:17225206]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17219841 17243115 enh90
Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Uterus Thymus
Transcript factors that have rs544909474[chr1:17225206]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17225192 17225207 MEF2C JASPAR yes 27063049
chr1 17225193 17225208 MEF2A JASPAR yes 27063051
chr1 17225194 17225206 MEF2A JASPAR yes 27063055
chr1 17225204 17225209 GATA2 JASPAR yes 27063057
chr1 17225206 17225217 FOXC1 JASPAR yes 27063058
Genes associated with rs544909474[chr1:17225206], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More