EnhancerDB
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  3. rs545108820[chr1:200408832]
Enhancers that have rs545108820[chr1:200408832]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200395745 200424875 enh27417
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Astrocyte Peripheral Blood (MM.1S) Lung (PC-9) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs545108820[chr1:200408832]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200403827 200409116 AR GTRD no Prostate (PC-3) 21363470
chr1 200406760 200409298 ZNF274 GTRD no Cervix (HeLa-S3) 21363481
chr1 200407168 200412701 ZNF143 GTRD no Epithelial (MCF-7) 21363483
chr1 200408336 200411190 ZNF274 GTRD no Cervix (HeLa-S3) 21363489
chr1 200408425 200409575 ZNF143 GTRD no Epithelial (MCF-7) 21363490
chr1 200408540 200411056 ZNF143 GTRD no Epithelial (MCF-7) 21363491
chr1 200408545 200411002 ZNF143 GTRD no Epithelial (MCF-7) 21363492
chr1 200408560 200411134 ZNF143 GTRD no Epithelial (MCF-7) 21363493
chr1 200408739 200412574 ZNF143 GTRD no Epithelial (MCF-7) 21363494
chr1 200408818 200410590 ZNF143 GTRD no Epithelial (MCF-7) 21363495
chr1 200408818 200411179 ZNF143 GTRD no Epithelial (MCF-7) 21363496
chr1 200408820 200408836 NFYA JASPAR yes 34447440
chr1 200408820 200408838 RARA JASPAR yes 34447441
chr1 200408823 200408838 NFYB JASPAR yes 34447442
chr1 200408828 200408849 IRF1 JASPAR yes 34447443
Genes associated with rs545108820[chr1:200408832], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More