EnhancerDB
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  3. rs545343496[chr1:38562140]
Enhancers that have rs545343496[chr1:38562140]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 38546605 38564055 enh49714
Brain (SK-N-MC) Large Intestine Muscle (A673) Pancreas Neural Stem Cells (H9)
Transcript factors that have rs545343496[chr1:38562140]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 38562127 38562148 IRF1 JASPAR yes 28197485
chr1 38562131 38562143 IRF1 JASPAR yes 28197486
chr1 38562132 38562147 MEF2A JASPAR yes 28197487
chr1 38562133 38562148 FOXP1 JASPAR yes 28197488
chr1 38562133 38562148 MEF2C JASPAR yes 28197489
chr1 38562134 38562146 FOXC2 JASPAR yes 28197490
chr1 38562134 38562146 MEF2A JASPAR yes 28197491
chr1 38562134 38562146 MEF2B JASPAR yes 28197492
chr1 38562134 38562146 MEF2D JASPAR yes 28197493
chr1 38562135 38562145 MEF2A JASPAR yes 28197494
chr1 38562136 38562140 YY1 TRANSFAC yes 28197495
chr1 38562137 38562153 POU4F3 JASPAR yes 28197496
chr1 38562138 38562153 FOXA1 JASPAR yes 28197497
chr1 38562139 38562151 FOXI1 JASPAR yes 28197498
chr1 38562139 38562153 POU4F1 JASPAR yes 28197499
chr1 38562139 38562154 FOXP1 JASPAR yes 28197500
chr1 38562139 38562154 HNF1A JASPAR yes 28197501
chr1 38562140 38562152 FOXC2 JASPAR yes 28197502
chr1 38562140 38562154 ONECUT2 JASPAR yes 28197503
chr1 38562140 38562154 ONECUT3 JASPAR yes 28197504
Genes associated with rs545343496[chr1:38562140], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More