EnhancerDB
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  3. rs545485919[chr6:40925404]
Enhancers that have rs545485919[chr6:40925404]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 40922705 40932367 enh38992
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Lung (PC-9) Astrocyte Bone (Osteoblast) Lung (A549) Colon (HCT116) Muscle (Myoblast) Pancreas Pancreas (Panc1)
Transcript factors that have rs545485919[chr6:40925404]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 40925396 40925415 CTCF JASPAR yes 101623623
chr6 40925401 40925410 SNAI2 JASPAR yes 101623624
chr6 40925401 40925411 FIGLA JASPAR yes 101623625
chr6 40925401 40925411 ID4 JASPAR yes 101623626
chr6 40925401 40925411 MSC JASPAR yes 101623627
chr6 40925401 40925411 MYF6 JASPAR yes 101623628
chr6 40925401 40925411 TCF3 JASPAR yes 101623629
chr6 40925401 40925411 TCF4 JASPAR yes 101623630
Genes associated with rs545485919[chr6:40925404], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More