EnhancerDB
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  3. rs545547979[chr1:209916073]
Enhancers that have rs545547979[chr1:209916073]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209912645 209924275 enh12622
Bone Marrow (K562) Prostate (PC-3) Large Intestine Ovary Blood (T-cell) Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Pancreas Pancreas (Panc1) Thymus Heart
chr1 209915892 209916078 vista4924
VISTA
Transcript factors that have rs545547979[chr1:209916073]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209915813 209916089 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107866399
chr1 209916054 209916075 IRF1 JASPAR yes 34993796
chr1 209916054 209916075 IRF1 JASPAR yes 118449674
chr1 209916061 209916076 FOXP1 JASPAR yes 34993797
chr1 209916061 209916076 FOXP1 JASPAR yes 118449675
chr1 209916064 209916084 RREB1 JASPAR yes 34993798
chr1 209916064 209916084 RREB1 JASPAR yes 118449676
chr1 209916068 209916074 TCF4 TRANSFAC yes 34993799
chr1 209916068 209916074 TCF4 TRANSFAC yes 118449677
chr1 209916069 209916081 FOXC2 JASPAR yes 34993800
chr1 209916069 209916081 FOXC2 JASPAR yes 118449678
chr1 209916070 209916091 IRF1 JASPAR yes 34993801
chr1 209916070 209916091 IRF1 JASPAR yes 118449679
chr1 209916071 209916086 FOXP1 JASPAR yes 34993802
chr1 209916071 209916086 FOXP1 JASPAR yes 118449680
chr1 209916071 209916092 IRF1 JASPAR yes 34993803
chr1 209916071 209916092 IRF1 JASPAR yes 118449681
chr1 209916072 209916087 STAT2 JASPAR yes 34993804
chr1 209916072 209916087 STAT2 JASPAR yes 118449682
chr1 209916073 209916088 FOXP1 JASPAR yes 34993805
chr1 209916073 209916088 FOXP1 JASPAR yes 118449683
Genes associated with rs545547979[chr1:209916073], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More