EnhancerDB
  1. Home
  2. SNP
  3. rs545937604[chr1:42240443]
Enhancers that have rs545937604[chr1:42240443]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs545937604[chr1:42240443]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42240440 42240444 YY1 TRANSFAC yes 28420929
chr1 42240441 42240456 FOXA1 JASPAR yes 28420930
chr1 42240442 42240454 FOXI1 JASPAR yes 28420931
chr1 42240442 42240456 POU4F1 JASPAR yes 28420932
chr1 42240442 42240457 FOXP1 JASPAR yes 28420933
chr1 42240442 42240457 HNF1A JASPAR yes 28420934
chr1 42240443 42240455 FOXC2 JASPAR yes 28420935
chr1 42240443 42240457 ONECUT2 JASPAR yes 28420936
chr1 42240443 42240457 ONECUT3 JASPAR yes 28420937
Genes associated with rs545937604[chr1:42240443], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More