EnhancerDB
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  3. rs546213588[chr16:88060189]
Enhancers that have rs546213588[chr16:88060189]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88040585 88061035 enh4183
Prostate (PC-3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung (A549) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Stomach
Transcript factors that have rs546213588[chr16:88060189]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88058820 88061458 ZNF143 GTRD no Epithelial (MCF-7) 108221779
chr16 88058869 88060523 ZNF143 GTRD no Epithelial (MCF-7) 108221780
chr16 88060179 88060193 PAX6 JASPAR yes 12257943
chr16 88060181 88060195 PAX6 JASPAR yes 12257944
Genes associated with rs546213588[chr16:88060189], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More