EnhancerDB
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  3. rs546254232[chr12:48298090]
Enhancers that have rs546254232[chr12:48298090]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 48274565 48298301 enh43733
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Esophagus Liver Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs546254232[chr12:48298090]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 48296268 48298906 ZNF274 GTRD no Bone Marrow (K562) 108029179
chr12 48297500 48298160 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21543977
chr12 48297500 48298160 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108029180
chr12 48297586 48298203 ZNF263 UCSC Txn Factor no Conserved 108029184
chr12 48297780 48298100 ZNF274 GTRD no Bone Marrow (K562) 108029198
chr12 48297791 48298441 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21543988
chr12 48297791 48298441 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108029199
chr12 48297855 48298235 ZNF274 GTRD no Cervix (HeLa-S3) 21543989
chr12 48297855 48298235 ZNF274 GTRD no Cervix (HeLa-S3) 108029200
chr12 48298071 48298092 REST JASPAR yes 120726991
chr12 48298076 48298091 ZIC4 JASPAR yes 120726993
chr12 48298078 48298093 RUNX2 JASPAR yes 120726994
Genes associated with rs546254232[chr12:48298090], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More