EnhancerDB
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  3. rs546291199[chr1:220545226]
Enhancers that have rs546291199[chr1:220545226]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220534493 220550315 enh12681
Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Brain (SK-N-SH) Bone (Osteoblast) Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs546291199[chr1:220545226]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220544740 220545645 ZNF143 GTRD no Epithelial (MCF-7) 21381703
chr1 220544744 220545589 ZNF143 GTRD no Epithelial (MCF-7) 21381704
chr1 220544790 220545732 ZNF274 GTRD no Cervix (HeLa-S3) 21381707
chr1 220544853 220545581 ZNF143 GTRD no Epithelial (MCF-7) 21381709
chr1 220544897 220545393 ZNF143 GTRD no Epithelial (MCF-7) 21381710
chr1 220544901 220545567 ZNF143 GTRD no Epithelial (MCF-7) 21381711
chr1 220544904 220545549 ZNF143 GTRD no Epithelial (MCF-7) 21381712
chr1 220544927 220545390 ZNF143 GTRD no Epithelial (MCF-7) 21381713
chr1 220544939 220545496 ZNF143 GTRD no Epithelial (MCF-7) 21381714
chr1 220544966 220545372 ZNF274 GTRD no Cervix (HeLa-S3) 21381715
chr1 220545018 220545360 ZNF143 GTRD no Epithelial (MCF-7) 21381716
chr1 220545035 220545370 ZNF143 GTRD no Epithelial (MCF-7) 21381717
chr1 220545066 220545533 ZNF143 GTRD no Epithelial (MCF-7) 21381718
chr1 220545134 220545367 ZNF274 GTRD no Cervix (HeLa-S3) 21381719
Genes associated with rs546291199[chr1:220545226], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More