EnhancerDB
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  3. rs546418202[chr17:38272805]
Enhancers that have rs546418202[chr17:38272805]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38259185 38273195 enh4407
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Kidney Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs546418202[chr17:38272805]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38272799 38272814 HNF4A JASPAR yes 54194720
chr17 38272800 38272814 RXRB JASPAR yes 54194721
chr17 38272800 38272814 RXRG JASPAR yes 54194722
chr17 38272800 38272815 HNF4G JASPAR yes 54194723
chr17 38272800 38272815 LEF1 JASPAR yes 54194724
chr17 38272801 38272815 TCF7L2 JASPAR yes 54194725
chr17 38272803 38272810 TCF4 TRANSFAC yes 54194726
chr17 38272804 38272810 LEF1 TRANSFAC yes 54194727
chr17 38272804 38272810 TCF4 TRANSFAC yes 54194728
Genes associated with rs546418202[chr17:38272805], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More