EnhancerDB
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  3. rs546541701[chr18:55687410]
Enhancers that have rs546541701[chr18:55687410]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55677725 55693595 enh4867
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Esophagus Blood (OCI-LY7) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Spleen Epithelial (MCF-7)
Transcript factors that have rs546541701[chr18:55687410]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55686954 55687789 ZNF274 GTRD no Bone Marrow (K562) 108338030
chr18 55687402 55687413 CDX2 JASPAR yes 110909165
chr18 55687406 55687410 TEAD2 TRANSFAC yes 110909166
chr18 55687406 55687411 TBP TRANSFAC yes 110909167
chr18 55687406 55687412 TFIID TRANSFAC yes 110909168
Genes associated with rs546541701[chr18:55687410], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More