EnhancerDB
  1. Home
  2. SNP
  3. rs546544007[chr1:17452419]
Enhancers that have rs546544007[chr1:17452419]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17446485 17458935 enh11552
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs546544007[chr1:17452419]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17452418 17452430 GLI2 JASPAR yes 27070209
chr1 17452419 17452428 RUNX2 JASPAR yes 27070210
chr1 17452419 17452429 RUNX3 JASPAR yes 27070211
chr1 17452419 17452438 CTCF JASPAR yes 27070212
Genes associated with rs546544007[chr1:17452419], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More