EnhancerDB
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  3. rs546572536[chr1:172945854]
Enhancers that have rs546572536[chr1:172945854]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172934137 172951875 enh12379
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Thymus Stomach
Transcript factors that have rs546572536[chr1:172945854]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172945362 172945906 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21350820
chr1 172945563 172946107 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21350826
chr1 172945572 172945856 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21350827
chr1 172945632 172945892 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21350828
chr1 172945705 172945949 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21350829
chr1 172945714 172945927 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21350830
chr1 172945732 172946022 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21350831
chr1 172945842 172945856 JUN JASPAR yes 33174292
chr1 172945845 172945856 JUNB JASPAR yes 33174293
chr1 172945846 172945857 FOSL1 JASPAR yes 33174294
chr1 172945847 172945854 JUN TRANSFAC yes 33174295
chr1 172945848 172945859 BATF JASPAR yes 33174296
chr1 172945851 172945866 FOXP1 JASPAR yes 33174297
chr1 172945852 172945867 FOXP1 JASPAR yes 33174298
chr1 172945853 172945868 FOXP1 JASPAR yes 33174299
chr1 172945853 172945874 IRF1 JASPAR yes 33174300
chr1 172945854 172945869 FOXP1 JASPAR yes 33174301
chr1 172945854 172945875 IRF1 JASPAR yes 33174302
Genes associated with rs546572536[chr1:172945854], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More