EnhancerDB
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  3. rs546612794[chr12:109000338]
Enhancers that have rs546612794[chr12:109000338]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 108997229 109015819 enh14971
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs546612794[chr12:109000338]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109000330 109000341 ELK4 JASPAR yes 123605718
chr12 109000331 109000341 ELK1 JASPAR yes 123605719
chr12 109000331 109000341 ELK3 JASPAR yes 123605720
chr12 109000331 109000341 ERF JASPAR yes 123605721
chr12 109000331 109000341 ERG JASPAR yes 123605722
chr12 109000331 109000341 ETS1 JASPAR yes 123605723
chr12 109000331 109000341 ETV1 JASPAR yes 123605724
chr12 109000331 109000341 ETV3 JASPAR yes 123605725
chr12 109000331 109000341 ETV4 JASPAR yes 123605726
chr12 109000331 109000341 ETV5 JASPAR yes 123605727
chr12 109000331 109000341 FEV JASPAR yes 123605728
chr12 109000331 109000341 FLI1 JASPAR yes 123605729
chr12 109000331 109000341 GABPA JASPAR yes 123605730
chr12 109000331 109000342 ETV2 JASPAR yes 123605731
chr12 109000332 109000341 ELK4 JASPAR yes 123605732
chr12 109000333 109000339 ETS1 JASPAR yes 123605733
chr12 109000333 109000339 SPI1 JASPAR yes 123605734
chr12 109000333 109000343 ELK1 JASPAR yes 123605735
Genes associated with rs546612794[chr12:109000338], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More