EnhancerDB
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  3. rs546624757[chr17:60252036]
Enhancers that have rs546624757[chr17:60252036]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 60237265 60252315 enh17274
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Large Intestine Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs546624757[chr17:60252036]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 21777818
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 21777819
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280259
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280260
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280261
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280262
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280263
chr17 60249603 60253517 ZNF143 GTRD no Epithelial (MCF-7) 21777859
chr17 60249603 60253517 ZNF143 GTRD no Epithelial (MCF-7) 108280323
chr17 60250994 60255066 ZNF143 GTRD no Epithelial (MCF-7) 21777896
chr17 60250994 60255066 ZNF143 GTRD no Epithelial (MCF-7) 21777897
chr17 60252015 60252036 IRF1 JASPAR yes 55189800
chr17 60252016 60252037 IRF1 JASPAR yes 55189802
chr17 60252021 60252036 FOXP1 JASPAR yes 55189807
chr17 60252022 60252037 FOXP1 JASPAR yes 55189808
chr17 60252023 60252038 FOXP1 JASPAR yes 55189809
chr17 60252024 60252039 FOXP1 JASPAR yes 55189810
chr17 60252025 60252040 FOXP1 JASPAR yes 55189811
Genes associated with rs546624757[chr17:60252036], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More