EnhancerDB
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  3. rs546628257[chr19:2065678]
Enhancers that have rs546628257[chr19:2065678]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2053625 2070755 enh4956
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myotube) Heart
Transcript factors that have rs546628257[chr19:2065678]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2064108 2065792 ZNF274 GTRD no Cervix (HeLa-S3) 21834640
chr19 2064108 2065792 ZNF274 GTRD no Cervix (HeLa-S3) 108357506
chr19 2064229 2065801 ZNF274 GTRD no Liver (HepG2) 108357510
chr19 2064247 2065735 ZNF274 GTRD no Liver (HepG2) 108357511
chr19 2064525 2065768 ZNF274 GTRD no Liver (HepG2) 108357516
chr19 2064653 2065689 ZNF274 GTRD no Blood (GM12878) 108357519
chr19 2064782 2065679 ZNF274 GTRD no Blood (GM12878) 108357525
chr19 2064823 2065819 AR GTRD no Prostate (PC-3) 21834647
chr19 2064823 2065819 AR GTRD no Prostate (PC-3) 108357527
chr19 2065678 2065689 USF1 JASPAR yes 112046575
chr19 2065678 2065689 USF2 JASPAR yes 112046576
Genes associated with rs546628257[chr19:2065678], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More