EnhancerDB
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  3. rs546665488[chr17:40769003]
Enhancers that have rs546665488[chr17:40769003]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40767925 40773235 enh48036
Bone Marrow (K562) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Blood (OCI-LY7) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs546665488[chr17:40769003]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40768990 40769005 MEF2C JASPAR yes 54312067
chr17 40768991 40769006 MEF2A JASPAR yes 54312068
chr17 40768992 40769004 MEF2A JASPAR yes 54312069
chr17 40768992 40769004 MEF2B JASPAR yes 54312070
chr17 40768992 40769004 MEF2D JASPAR yes 54312071
chr17 40768998 40769013 MEF2C JASPAR yes 54312072
chr17 40768998 40769019 IRF1 JASPAR yes 54312073
chr17 40768999 40769014 FOXP1 JASPAR yes 54312074
chr17 40768999 40769020 IRF1 JASPAR yes 54312075
chr17 40769002 40769017 FOXP1 JASPAR yes 54312076
chr17 40769003 40769018 STAT2 JASPAR yes 54312077
Genes associated with rs546665488[chr17:40769003], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More