EnhancerDB
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  3. rs546736767[chr2:202827653]
Enhancers that have rs546736767[chr2:202827653]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 202823145 202847619 enh6112
Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell)
Transcript factors that have rs546736767[chr2:202827653]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 202827643 202827658 TFAP2A JASPAR yes 80169455
chr2 202827643 202827658 TFAP2C JASPAR yes 80169456
chr2 202827645 202827658 TFAP2A JASPAR yes 80169457
chr2 202827645 202827658 TFAP2B JASPAR yes 80169458
chr2 202827645 202827658 TFAP2C JASPAR yes 80169459
chr2 202827645 202827660 TFAP2A JASPAR yes 80169460
chr2 202827645 202827660 TFAP2C JASPAR yes 80169461
chr2 202827646 202827658 TFAP2B JASPAR yes 80169462
chr2 202827646 202827658 TFAP2C JASPAR yes 80169463
chr2 202827652 202827672 ESR1 JASPAR yes 80169464
chr2 202827653 202827657 LFA1 TRANSFAC yes 80169465
Genes associated with rs546736767[chr2:202827653], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More