EnhancerDB
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  3. rs546816381[chr1:117008812]
Enhancers that have rs546816381[chr1:117008812]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs546816381[chr1:117008812]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117008441 117009188 ZNF274 GTRD no Bone Marrow (K562) 21332685
chr1 117008490 117009034 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21332686
chr1 117008490 117009106 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21332687
chr1 117008562 117009018 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21332688
chr1 117008590 117008980 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21332690
chr1 117008603 117008943 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21332691
chr1 117008632 117008922 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21332692
chr1 117008638 117008898 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21332693
chr1 117008642 117008923 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21332694
chr1 117008645 117009097 ZNF274 GTRD no Bone Marrow (K562) 21332695
chr1 117008647 117009029 ZNF274 GTRD no Bone Marrow (K562) 21332696
chr1 117008652 117008925 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21332697
chr1 117008653 117008929 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21332698
chr1 117008664 117009024 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21332699
chr1 117008665 117008865 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21332700
chr1 117008671 117009107 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21332701
chr1 117008671 117009197 ZNF143 GTRD no Epithelial (MCF-7) 21332702
chr1 117008673 117008897 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21332703
chr1 117008695 117008919 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21332704
chr1 117008704 117008974 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21332705
chr1 117008707 117008892 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21332706
chr1 117008718 117008978 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21332707
chr1 117008722 117009038 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21332708
chr1 117008722 117009045 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21332709
chr1 117008735 117008875 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21332710
chr1 117008758 117008902 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21332711
chr1 117008774 117008975 ZNF143 GTRD no Epithelial (MCF-7) 21332712
chr1 117008804 117008812 FOXC1 JASPAR yes 31809537
chr1 117008808 117009034 ZNF274 GTRD no Cervix (HeLa-S3) 21332713
Genes associated with rs546816381[chr1:117008812], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More