EnhancerDB
  1. Home
  2. SNP
  3. rs546838339[chr2:120464477]
Enhancers that have rs546838339[chr2:120464477]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 120449136 120464615 enh5803
Prostate (PC-3) Prostate (RWPE1) Blood (T-cell) Esophagus Blood (OCI-LY7) Muscle (A673) Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus
Transcript factors that have rs546838339[chr2:120464477]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 120464466 120464481 FOXA1 JASPAR yes 76495795
chr2 120464467 120464479 FOXI1 JASPAR yes 76495796
chr2 120464467 120464481 POU4F1 JASPAR yes 76495797
chr2 120464467 120464482 FOXP1 JASPAR yes 76495798
chr2 120464467 120464482 HNF1A JASPAR yes 76495799
chr2 120464468 120464480 FOXC2 JASPAR yes 76495800
chr2 120464468 120464482 ONECUT2 JASPAR yes 76495801
chr2 120464468 120464482 ONECUT3 JASPAR yes 76495802
chr2 120464469 120464480 FOXB1 JASPAR yes 76495803
chr2 120464469 120464480 FOXC1 JASPAR yes 76495804
chr2 120464469 120464480 PROP1 JASPAR yes 76495805
chr2 120464470 120464485 FOXA1 JASPAR yes 76495807
chr2 120464471 120464483 FOXI1 JASPAR yes 76495808
chr2 120464471 120464486 FOXP1 JASPAR yes 76495809
chr2 120464472 120464484 FOXC2 JASPAR yes 76495810
chr2 120464472 120464486 ONECUT2 JASPAR yes 76495811
chr2 120464472 120464486 ONECUT3 JASPAR yes 76495812
chr2 120464473 120464484 FOXB1 JASPAR yes 76495813
chr2 120464473 120464484 FOXC1 JASPAR yes 76495814
chr2 120464474 120464478 YY1 TRANSFAC yes 76495815
Genes associated with rs546838339[chr2:120464477], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More