EnhancerDB
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  3. rs546941484[chr1:7539875]
Enhancers that have rs546941484[chr1:7539875]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 7527289 7545958 enh11454
Astrocyte Adrenal Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Spleen Lung Muscle (A673) Heart
Transcript factors that have rs546941484[chr1:7539875]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 7537640 7539989 TCF7L2 GTRD no Colon (HCT116) 107801928
chr1 7538625 7540721 ZNF274 GTRD no Bone Marrow (K562) 107801929
chr1 7539871 7539884 SMAD2 JASPAR yes 26467863
chr1 7539871 7539885 TLX1 JASPAR yes 26467864
chr1 7539872 7539886 TLX1 JASPAR yes 26467865
chr1 7539873 7539886 SMAD2 JASPAR yes 26467866
Genes associated with rs546941484[chr1:7539875], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More