EnhancerDB
  1. Home
  2. SNP
  3. rs547053488[chr2:238649059]
Enhancers that have rs547053488[chr2:238649059]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238648865 238656355 enh34437
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs547053488[chr2:238649059]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238649053 238649068 FOXP1 JASPAR yes 82138990
chr2 238649056 238649067 FOXP2 JASPAR yes 82138991
chr2 238649056 238649070 IRF7 JASPAR yes 82138992
chr2 238649058 238649067 SRY JASPAR yes 82138993
chr2 238649058 238649070 IRF1 JASPAR yes 82138994
chr2 238649058 238649073 STAT2 JASPAR yes 82138995
chr2 238649059 238649074 FOXP1 JASPAR yes 82138996
chr2 238649059 238649080 IRF1 JASPAR yes 82138997
Genes associated with rs547053488[chr2:238649059], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More