EnhancerDB
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  3. rs547400475[chr1:42212345]
Enhancers that have rs547400475[chr1:42212345]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42199705 42213143 enh290
Prostate (PC-3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Muscle (Myoblast) Thymus Stomach
Transcript factors that have rs547400475[chr1:42212345]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42212337 42212351 TLX1 JASPAR yes 28416833
chr1 42212338 42212347 NKX3-2 JASPAR yes 28416834
chr1 42212339 42212347 ISL2 JASPAR yes 28416835
Genes associated with rs547400475[chr1:42212345], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More