EnhancerDB
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  3. rs547401062[chr1:117014526]
Enhancers that have rs547401062[chr1:117014526]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs547401062[chr1:117014526]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117012883 117014669 ZNF143 GTRD no Epithelial (MCF-7) 21332755
chr1 117013043 117014600 ZNF143 GTRD no Epithelial (MCF-7) 21332762
chr1 117013110 117014607 ZNF143 GTRD no Epithelial (MCF-7) 21332767
chr1 117014129 117014641 ZNF274 GTRD no Bone Marrow (K562) 21332800
chr1 117014134 117014602 ZNF274 GTRD no Bone Marrow (K562) 21332801
chr1 117014279 117014576 TCF7L2 GTRD no Colon (HCT116) 21332802
chr1 117014515 117014528 EOMES JASPAR yes 31810359
chr1 117014517 117014527 TBR1 JASPAR yes 31810360
chr1 117014517 117014528 TBX20 JASPAR yes 31810361
chr1 117014517 117014528 TBX2 JASPAR yes 31810362
chr1 117014518 117014528 TBX21 JASPAR yes 31810363
chr1 117014519 117014527 MGA JASPAR yes 31810364
chr1 117014519 117014527 TBX15 JASPAR yes 31810365
chr1 117014519 117014527 TBX1 JASPAR yes 31810366
chr1 117014519 117014527 TBX4 JASPAR yes 31810367
chr1 117014519 117014527 TBX5 JASPAR yes 31810368
Genes associated with rs547401062[chr1:117014526], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More