EnhancerDB
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  3. rs547494260[chr6:42335570]
Enhancers that have rs547494260[chr6:42335570]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42330865 42350575 enh9115
Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus Heart
Transcript factors that have rs547494260[chr6:42335570]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42335562 42335583 IRF1 JASPAR yes 101713386
chr6 42335566 42335580 SPI1 JASPAR yes 101713387
chr6 42335566 42335580 SPIC JASPAR yes 101713388
chr6 42335566 42335581 STAT2 JASPAR yes 101713389
chr6 42335570 42335580 ETV6 JASPAR yes 101713390
Genes associated with rs547494260[chr6:42335570], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More