EnhancerDB
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  3. rs547941657[chr1:200303031]
Enhancers that have rs547941657[chr1:200303031]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200297972 200315295 enh868
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs547941657[chr1:200303031]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200301712 200303487 ZNF143 GTRD no Epithelial (MCF-7) 21363033
chr1 200301722 200303174 ZNF143 GTRD no Epithelial (MCF-7) 21363034
chr1 200301916 200303073 ZNF143 GTRD no Epithelial (MCF-7) 21363041
chr1 200302006 200303281 ZNF143 GTRD no Epithelial (MCF-7) 21363050
chr1 200302032 200303289 ZNF143 GTRD no Epithelial (MCF-7) 21363054
chr1 200302033 200303229 ZNF143 GTRD no Epithelial (MCF-7) 21363055
chr1 200302102 200303042 ZNF143 GTRD no Epithelial (MCF-7) 21363061
chr1 200302959 200303198 ZNF143 GTRD no Epithelial (MCF-7) 21363077
chr1 200302969 200303205 ZNF143 GTRD no Epithelial (MCF-7) 21363078
chr1 200303026 200303031 TFAP2A TRANSFAC yes 34435681
chr1 200303026 200303032 MZF1 JASPAR yes 34435682
chr1 200303026 200303047 ZNF263 JASPAR yes 34435683
Genes associated with rs547941657[chr1:200303031], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More