EnhancerDB
  1. Home
  2. SNP
  3. rs548117852[chr16:12430009]
Enhancers that have rs548117852[chr16:12430009]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 12421166 12439275 enh3900
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Colon (HCT116) Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs548117852[chr16:12430009]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 12430007 12430021 ONECUT1 JASPAR yes 9571660
chr16 12430007 12430021 ONECUT2 JASPAR yes 9571661
chr16 12430007 12430021 ONECUT3 JASPAR yes 9571662
chr16 12430007 12430023 POU4F2 JASPAR yes 9571663
chr16 12430008 12430018 CUX1 JASPAR yes 9571664
chr16 12430008 12430018 CUX2 JASPAR yes 9571665
Genes associated with rs548117852[chr16:12430009], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More