EnhancerDB
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  3. rs548141797[chr18:57587424]
Enhancers that have rs548141797[chr18:57587424]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 57569615 57596800 enh4881
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Lung (PC-9) Pancreas Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs548141797[chr18:57587424]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 57585313 57588820 ZNF274 GTRD no Bone Marrow (K562) 21825055
chr18 57585313 57588820 ZNF274 GTRD no Bone Marrow (K562) 108338913
chr18 57585408 57587527 ZNF274 GTRD no Blood (GM12878) 21825057
chr18 57585408 57587527 ZNF274 GTRD no Blood (GM12878) 108338914
chr18 57585477 57588845 ZNF274 GTRD no Bone Marrow (K562) 21825059
chr18 57585477 57588845 ZNF274 GTRD no Bone Marrow (K562) 108338916
chr18 57585478 57587462 ZNF274 GTRD no Blood (GM12878) 21825060
chr18 57585478 57587462 ZNF274 GTRD no Blood (GM12878) 108338917
chr18 57585793 57587471 ZNF274 GTRD no Bone Marrow (K562) 21825139
chr18 57585793 57587471 ZNF274 GTRD no Bone Marrow (K562) 108339002
chr18 57585858 57587617 ZNF143 GTRD no Epithelial (MCF-7) 21825151
chr18 57585858 57587617 ZNF143 GTRD no Epithelial (MCF-7) 108339014
chr18 57585892 57587462 ZBTB33 GTRD no Lung (A549) 108339016
chr18 57586445 57587485 ZNF274 GTRD no Bone Marrow (K562) 21825228
chr18 57586457 57587546 ZNF274 GTRD no Bone Marrow (K562) 21825229
chr18 57586590 57587477 ZNF274 GTRD no Bone Marrow (K562) 21825240
chr18 57586875 57588227 ZNF274 GTRD no Bone Marrow (K562) 21825253
chr18 57587143 57587591 ZNF274 GTRD no Bone Marrow (K562) 21825254
chr18 57587406 57587426 RREB1 JASPAR yes 111064731
Genes associated with rs548141797[chr18:57587424], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More