EnhancerDB
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  3. rs548213982[chr17:29140588]
Enhancers that have rs548213982[chr17:29140588]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 29131085 29149175 enh17090
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Esophagus Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Blood (T-cell)
Transcript factors that have rs548213982[chr17:29140588]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 29140579 29140595 POU4F2 JASPAR yes 53811644
chr17 29140579 29140595 POU4F3 JASPAR yes 53811645
chr17 29140581 29140595 POU4F1 JASPAR yes 53811647
chr17 29140582 29140592 EMX1 JASPAR yes 53811648
chr17 29140582 29140592 EMX2 JASPAR yes 53811649
chr17 29140582 29140592 GSX1 JASPAR yes 53811650
chr17 29140582 29140592 LHX2 JASPAR yes 53811651
chr17 29140582 29140592 LHX6 JASPAR yes 53811652
chr17 29140582 29140592 MIXL1 JASPAR yes 53811653
chr17 29140582 29140592 MNX1 JASPAR yes 53811654
chr17 29140582 29140592 NOTO JASPAR yes 53811655
chr17 29140582 29140592 POU6F1 JASPAR yes 53811656
chr17 29140582 29140592 RAX JASPAR yes 53811657
chr17 29140583 29140591 ISX JASPAR yes 53811658
chr17 29140583 29140591 LMX1A JASPAR yes 53811659
chr17 29140583 29140591 LMX1B JASPAR yes 53811660
chr17 29140583 29140591 NKX6-1 JASPAR yes 53811661
chr17 29140583 29140591 NKX6-2 JASPAR yes 53811662
chr17 29140583 29140591 PRRX1 JASPAR yes 53811663
chr17 29140583 29140591 RAX2 JASPAR yes 53811664
chr17 29140583 29140591 SHOX JASPAR yes 53811665
chr17 29140583 29140591 UNCX JASPAR yes 53811666
chr17 29140583 29140591 VAX1 JASPAR yes 53811667
Genes associated with rs548213982[chr17:29140588], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More