EnhancerDB
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  3. rs548215578[chr17:6562192]
Enhancers that have rs548215578[chr17:6562192]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 6552025 6577412 enh4228
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Blood (OCI-LY7) Colon (HCT116) Blood (Karpas-422) Lung (PC-9)
Transcript factors that have rs548215578[chr17:6562192]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 6562183 6562195 TFAP2A JASPAR yes 52922720
chr17 6562183 6562195 TFAP2B JASPAR yes 52922721
chr17 6562183 6562195 TFAP2C JASPAR yes 52922722
Genes associated with rs548215578[chr17:6562192], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More