EnhancerDB
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  3. rs548225882[chr5:172185032]
Enhancers that have rs548225882[chr5:172185032]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172182745 172195855 enh8880
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Thymus Stomach
Transcript factors that have rs548225882[chr5:172185032]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172185024 172185043 CTCF JASPAR yes 67823070
chr5 172185026 172185035 THAP1 JASPAR yes 67823071
chr5 172185027 172185039 TFAP2B JASPAR yes 67823072
chr5 172185027 172185039 TFAP2C JASPAR yes 67823073
Genes associated with rs548225882[chr5:172185032], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More