EnhancerDB
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  3. rs548227837[chr19:2055669]
Enhancers that have rs548227837[chr19:2055669]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2053625 2070755 enh4956
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myotube) Heart
Transcript factors that have rs548227837[chr19:2055669]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2053764 2055850 TCF7L2 GTRD no Colon (HCT116) 21834139
chr19 2053949 2063305 TCF7L2 GTRD no Colon (HCT116) 21834143
chr19 2053949 2063305 TCF7L2 GTRD no Colon (HCT116) 108356650
chr19 2053949 2063305 TCF7L2 GTRD no Colon (HCT116) 108356651
chr19 2053949 2063305 TCF7L2 GTRD no Colon (HCT116) 108356652
chr19 2054425 2057089 ZNF274 GTRD no Cervix (HeLa-S3) 21834146
chr19 2054425 2057089 ZNF274 GTRD no Cervix (HeLa-S3) 108356653
chr19 2054538 2058987 ZNF274 GTRD no Blood (GM12878) 108356654
chr19 2054557 2056728 ZNF274 GTRD no Blood (GM12878) 108356655
chr19 2054606 2056845 ZNF274 GTRD no Blood (GM12878) 108356656
chr19 2055284 2056707 ZNF274 GTRD no Blood (GM12878) 108356657
chr19 2055284 2057329 ZNF274 GTRD no Blood (GM12878) 108356658
chr19 2055287 2057266 ZNF274 GTRD no Blood (GM12878) 108356659
chr19 2055288 2056738 ZNF274 GTRD no Blood (GM12878) 108356660
chr19 2055296 2056480 ZNF274 GTRD no Blood (GM12878) 108356661
chr19 2055323 2058813 ZNF274 GTRD no Bone Marrow (K562) 21834164
chr19 2055323 2058813 ZNF274 GTRD no Bone Marrow (K562) 108356662
chr19 2055336 2055791 ZNF274 GTRD no Bone Marrow (K562) 21834165
chr19 2055341 2058723 ZNF274 GTRD no Bone Marrow (K562) 21834166
chr19 2055341 2058723 ZNF274 GTRD no Bone Marrow (K562) 108356663
chr19 2055353 2057354 ZNF274 GTRD no Blood (GM12878) 108356664
chr19 2055359 2058651 ZNF274 GTRD no Bone Marrow (K562) 21834167
chr19 2055359 2058651 ZNF274 GTRD no Bone Marrow (K562) 108356665
chr19 2055361 2056893 ZNF274 GTRD no Bone Marrow (K562) 21834168
chr19 2055361 2056893 ZNF274 GTRD no Bone Marrow (K562) 108356666
chr19 2055377 2055781 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21834169
chr19 2055386 2056742 ZNF274 GTRD no Bone Marrow (K562) 21834170
chr19 2055386 2056742 ZNF274 GTRD no Bone Marrow (K562) 108356667
chr19 2055393 2056959 ZNF274 GTRD no Cervix (HeLa-S3) 21834171
chr19 2055393 2056959 ZNF274 GTRD no Cervix (HeLa-S3) 108356668
chr19 2055427 2056732 ZBTB33 GTRD no Lung (A549) 108356669
chr19 2055432 2055766 ZNF274 GTRD no Bone Marrow (K562) 21834172
chr19 2055437 2063159 TCF7L2 GTRD no Colon (HCT116) 21834173
chr19 2055437 2063159 TCF7L2 GTRD no Colon (HCT116) 108356670
chr19 2055437 2063159 TCF7L2 GTRD no Colon (HCT116) 108356671
chr19 2055437 2063159 TCF7L2 GTRD no Colon (HCT116) 108356672
chr19 2055452 2058398 ZBTB33 GTRD no Lung (A549) 108356673
chr19 2055476 2055771 ZNF274 GTRD no Bone Marrow (K562) 21834174
chr19 2055533 2056549 ZNF274 GTRD no Bone Marrow (K562) 21834175
chr19 2055533 2056549 ZNF274 GTRD no Bone Marrow (K562) 108356674
chr19 2055565 2056814 ZNF143 GTRD no Epithelial (MCF-7) 108356675
chr19 2055597 2057347 ZNF274 GTRD no Bone Marrow (K562) 21834176
chr19 2055597 2057347 ZNF274 GTRD no Bone Marrow (K562) 108356676
chr19 2055653 2056117 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21834177
chr19 2055666 2055671 MYB TRANSFAC yes 112045058
chr19 2055667 2057352 ZNF143 GTRD no Epithelial (MCF-7) 108356677
Genes associated with rs548227837[chr19:2055669], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More