EnhancerDB
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  3. rs548247966[chr1:200253384]
Enhancers that have rs548247966[chr1:200253384]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200249825 200279179 enh867
Prostate (PC-3) Liver (HepG2) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs548247966[chr1:200253384]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200253369 200253713 ZNF143 GTRD no Epithelial (MCF-7) 21362705
chr1 200253373 200253384 NFE2 JASPAR yes 34428569
chr1 200253374 200253385 FOSL2 JASPAR yes 34428570
chr1 200253380 200253385 MYC TRANSFAC yes 34428571
Genes associated with rs548247966[chr1:200253384], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More