EnhancerDB
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  3. rs548259272[chr6:83109406]
Enhancers that have rs548259272[chr6:83109406]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 83104459 83111666 enh39205
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs548259272[chr6:83109406]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 83109393 83109413 RREB1 JASPAR yes 103154156
chr6 83109394 83109414 RREB1 JASPAR yes 103154159
chr6 83109395 83109415 RREB1 JASPAR yes 103154161
chr6 83109399 83109420 ZNF263 JASPAR yes 103154162
chr6 83109400 83109421 ZNF263 JASPAR yes 103154163
chr6 83109401 83109406 ETS2 TRANSFAC yes 103154164
chr6 83109406 83109416 ZNF740 JASPAR yes 103154165
Genes associated with rs548259272[chr6:83109406], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More