EnhancerDB
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  3. rs548277518[chr1:232732676]
Enhancers that have rs548277518[chr1:232732676]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232723148 232738675 enh12785
Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myotube) Blood (T-cell) Heart
Transcript factors that have rs548277518[chr1:232732676]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232732103 232732898 ZNF143 GTRD no Epithelial (MCF-7) 21392269
chr1 232732143 232732899 ZNF143 GTRD no Epithelial (MCF-7) 21392270
chr1 232732169 232732710 ZNF143 GTRD no Epithelial (MCF-7) 21392271
chr1 232732244 232732813 ZNF143 GTRD no Epithelial (MCF-7) 21392272
chr1 232732261 232732823 ZNF143 GTRD no Epithelial (MCF-7) 21392273
chr1 232732275 232732857 ZNF143 GTRD no Epithelial (MCF-7) 21392274
chr1 232732309 232732995 ZNF143 GTRD no Epithelial (MCF-7) 21392275
chr1 232732665 232733035 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21392277
Genes associated with rs548277518[chr1:232732676], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More