EnhancerDB
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  3. rs548304408[chr1:42092739]
Enhancers that have rs548304408[chr1:42092739]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42077298 42108035 enh11792
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Breast Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Thymus Heart
Transcript factors that have rs548304408[chr1:42092739]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42092628 42092938 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107802962
chr1 42092739 42092759 PPARG JASPAR yes 28403124
Genes associated with rs548304408[chr1:42092739], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More