EnhancerDB
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  3. rs548413594[chr2:238648892]
Enhancers that have rs548413594[chr2:238648892]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238648865 238656355 enh34437
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs548413594[chr2:238648892]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238648885 238648900 FOXP1 JASPAR yes 82138963
chr2 238648887 238648908 IRF1 JASPAR yes 82138964
chr2 238648889 238648904 FOXP1 JASPAR yes 82138965
chr2 238648890 238648905 FOXP1 JASPAR yes 82138966
chr2 238648891 238648897 TBP TRANSFAC yes 82138967
chr2 238648891 238648906 FOXP1 JASPAR yes 82138968
chr2 238648892 238648907 FOXP1 JASPAR yes 82138969
Genes associated with rs548413594[chr2:238648892], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More