EnhancerDB
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  3. rs548438026[chr11:66853220]
Enhancers that have rs548438026[chr11:66853220]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 66841490 66853575 enh14015
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Esophagus Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs548438026[chr11:66853220]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 66848276 66863173 ZNF143 GTRD no Epithelial (MCF-7) 21497058
chr11 66848276 66863173 ZNF143 GTRD no Epithelial (MCF-7) 107983606
chr11 66849803 66853450 TCF7L2 GTRD no Colon (HCT116) 21497124
chr11 66851038 66853233 ZNF274 GTRD no Blood (GM12878) 21497133
chr11 66851656 66858491 ZNF143 GTRD no Epithelial (MCF-7) 21497149
chr11 66851657 66855027 ZNF143 GTRD no Epithelial (MCF-7) 21497150
chr11 66852092 66855249 TCF7L2 GTRD no Colon (HCT116) 21497167
chr11 66852166 66858516 ZNF143 GTRD no Epithelial (MCF-7) 21497172
chr11 66852176 66853327 TCF7L2 GTRD no Colon (HCT116) 21497173
chr11 66852226 66853604 TCF7L2 GTRD no Colon (HCT116) 21497174
chr11 66852433 66853240 TCF7L2 GTRD no Colon (HCT116) 21497176
chr11 66852580 66857286 ZNF143 GTRD no Epithelial (MCF-7) 21497177
chr11 66853140 66855240 TCF7L2 GTRD no Colon (HCT116) 21497178
chr11 66853196 66855367 ZNF143 GTRD no Epithelial (MCF-7) 21497179
chr11 66853214 66853224 POU6F2 JASPAR yes 39400666
chr11 66853215 66853225 GSX1 JASPAR yes 39400667
chr11 66853215 66853225 GSX2 JASPAR yes 39400668
chr11 66853215 66853225 HOXB3 JASPAR yes 39400669
chr11 66853215 66853226 HOXC13 JASPAR yes 39400670
chr11 66853215 66853226 HOXD12 JASPAR yes 39400671
chr11 66853216 66853224 NKX6-1 JASPAR yes 39400672
chr11 66853216 66853224 NKX6-2 JASPAR yes 39400673
chr11 66853216 66853226 HOXC10 JASPAR yes 39400674
chr11 66853216 66853226 HOXD13 JASPAR yes 39400675
chr11 66853218 66853222 YY1 TRANSFAC yes 39400676
Genes associated with rs548438026[chr11:66853220], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More