EnhancerDB
  1. Home
  2. SNP
  3. rs548448780[chr1:17027279]
Enhancers that have rs548448780[chr1:17027279]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17024091 17046215 enh11549
Kidney Brain (SK-N-SH) Prostate (RWPE1) Placenta Colon (HCT116) Thyroid Pancreas Blood (T-cell) Epithelial (MCF-7)
chr1 17027024 17027386 vista542
VISTA
Transcript factors that have rs548448780[chr1:17027279]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17025206 17028605 EZH2 UCSC Txn Factor no Conserved 107802242
chr1 17027269 17027284 TFAP2A JASPAR yes 27055571
chr1 17027269 17027284 TFAP2C JASPAR yes 27055572
chr1 17027269 17027284 TFAP2A JASPAR yes 118239786
chr1 17027269 17027284 TFAP2C JASPAR yes 118239787
chr1 17027272 17027283 TFAP2A JASPAR yes 27055576
chr1 17027272 17027283 TFAP2A JASPAR yes 118239791
chr1 17027272 17027284 TFAP2A JASPAR yes 27055577
chr1 17027272 17027284 TFAP2B JASPAR yes 27055578
chr1 17027272 17027284 TFAP2C JASPAR yes 27055579
chr1 17027272 17027284 TFAP2A JASPAR yes 118239792
chr1 17027272 17027284 TFAP2B JASPAR yes 118239793
chr1 17027272 17027284 TFAP2C JASPAR yes 118239794
chr1 17027273 17027282 TFAP2A JASPAR yes 27055580
chr1 17027273 17027282 TFAP2A JASPAR yes 118239795
chr1 17027278 17027291 ZBTB18 JASPAR yes 27055581
chr1 17027278 17027291 ZBTB18 JASPAR yes 118239796
Genes associated with rs548448780[chr1:17027279], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More