EnhancerDB
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  3. rs548451361[chr1:200151542]
Enhancers that have rs548451361[chr1:200151542]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200146725 200155834 enh27413
Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Pancreas Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs548451361[chr1:200151542]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200149128 200152220 ZNF143 GTRD no Epithelial (MCF-7) 21362567
chr1 200149202 200152250 ZNF143 GTRD no Epithelial (MCF-7) 21362568
chr1 200149518 200153004 ZNF143 GTRD no Epithelial (MCF-7) 21362569
chr1 200150022 200151577 ZNF143 GTRD no Epithelial (MCF-7) 21362570
chr1 200150141 200151561 ZNF143 GTRD no Epithelial (MCF-7) 21362572
chr1 200150197 200151549 ZNF143 GTRD no Epithelial (MCF-7) 21362573
chr1 200150336 200151549 ZNF143 GTRD no Epithelial (MCF-7) 21362577
chr1 200150372 200151625 ZNF143 GTRD no Epithelial (MCF-7) 21362581
chr1 200150420 200151565 ZNF143 GTRD no Epithelial (MCF-7) 21362588
chr1 200151539 200151554 FOXP1 JASPAR yes 34420482
chr1 200151540 200151555 FOXP1 JASPAR yes 34420483
chr1 200151541 200151556 FOXP1 JASPAR yes 34420484
chr1 200151541 200151562 IRF1 JASPAR yes 34420485
chr1 200151542 200151557 FOXP1 JASPAR yes 34420486
chr1 200151542 200151563 IRF1 JASPAR yes 34420487
Genes associated with rs548451361[chr1:200151542], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More